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Chinese Journal of Hepatic Surgery(Electronic Edition) ›› 2021, Vol. 10 ›› Issue (02): 215-219. doi: 10.3877/cma.j.issn.2095-3232.2021.02.020

Special Issue:

• Basic Research • Previous Articles     Next Articles

Bioinformatics study of pathogenesis of gallbladder cancer base on high-throughput mRNA sequencing

Chang Xu1, Jinghan Wang2, Qingbao Cheng2, Chen Liu2, Mingtai Hu1, Xiangji Luo1, Xiaoqing Jiang2,()   

  1. 1. Department III of Biliary Tract Diseases, Shanghai Eastern Hepatobiliary Surgery Hospital Affiliated to Second Military Medical University, Shanghai 200438, China
    2. Department Ⅰ of Biliary Tract Diseases, Shanghai Eastern Hepatobiliary Surgery Hospital Affiliated to Second Military Medical University, Shanghai 200438, China
  • Received:2021-01-07 Online:2021-04-10 Published:2021-05-21
  • Contact: Xiaoqing Jiang

Abstract:

Objective

To explore the pathogenesis of gallbladder carcinoma base on high-throughput mRNA sequencing and bioinformatics analysis.

Methods

10 patients with gallbladder carcinoma admitted to Shanghai Eastern Hepatobiliary Surgery Hospital from January 2017 to October 2018 were recruited in this study. High-throughput mRNA sequencing and bioinformatics analysis were performed on the gallbladder carcinoma and paracancerous normal tissues.

Results

1 704 differentially-expressed genes (DEGs) were identified from tumor tissues and adjacent normal tissues, including 523 DEGs were up-regulated and 1 181 DEGs were down-regulated. Among them, 674 DEGs were significantly enriched on 46 signaling pathways, including PI3K-Akt, MAPK, Ras, Wnt and other cancer-related signaling pathways as well as cell movement-related signaling pathways, among which the most significant pathway was neuroactive ligand-receptor interaction signaling pathway, and 45 DEGs were significantly enriched on the calcium signaling pathway.

Conclusions

High-throughput mRNA sequencing and bioinformatics analysis demonstrate that DEGs exist in gallbladder cancer and adjacent normal tissues. The most significant changes are noted on the neuroactive ligand-receptor interaction signaling pathway. Abnormal calcium signaling pathway is noted as a critical signaling pathway for progression from chronic calculous cholecystitis to gallbladder cancer.

Key words: Gallbladder neoplasms, High-throughput nucleotide sequencing, RNA, messenger

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